Sequence Similarity Clusters for the Entities in PDB 1F8U

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 583 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52434
95 % 16 19 1781 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 18 21 1672
70 % 94 107 177
50 % 228 257 102
40 % 228 257 127
30 % 299 349 73
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 7822
95 % 6 10 7685 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 6 10 7634
70 % 7 11 6571
50 % 20 37 1405
40 % 48 125 314
30 % 49 127 316

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures