Sequence Similarity Clusters for the Entities in PDB 1F8U

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 583 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 1586
95 % 16 19 1866 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 18 21 1776
70 % 94 107 180
50 % 231 260 106
40 % 231 263 128
30 % 304 354 72
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 8150
95 % 6 10 7314 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 6 10 7274
70 % 7 11 6321
50 % 20 38 1386
40 % 49 126 333
30 % 54 134 302

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures