Sequence Similarity Clusters for the Entities in PDB 1F8U

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 583 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51470
95 % 16 19 1711 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 18 21 1637
70 % 94 107 175
50 % 224 251 105
40 % 224 251 128
30 % 295 343 73
Entity #2 | Chains: B
FASCICULIN II protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 7642
95 % 6 10 7530 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 6 10 7478
70 % 7 11 6442
50 % 20 37 1379
40 % 48 124 307
30 % 49 126 307

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures