Sequence Similarity Clusters for the Entities in PDB 1F8T

Entity #1 | Chains: L
ANTIBODY FAB FRAGMENT (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27424
95 % 27 51 683 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 27 52 687
70 % 608 2287 1
50 % 1248 4633 1
40 % 1248 4633 1
30 % 1391 5461 1
Entity #2 | Chains: H
ANTIBODY FAB FRAGMENT (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39958
95 % 1 3 22871
90 % 3 17 2835
70 % 601 2244 2
50 % 1249 4633 1
40 % 1249 4633 1
30 % 1392 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.