Sequence Similarity Clusters for the Entities in PDB 1F8T

Entity #1 | Chains: L
ANTIBODY FAB FRAGMENT (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26551
95 % 25 49 718 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 25 50 711
70 % 483 1822 2
50 % 1222 4489 1
40 % 1222 4489 1
30 % 1358 5290 1
Entity #2 | Chains: H
ANTIBODY FAB FRAGMENT (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38775
95 % 1 3 22132 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 3 17 2758
70 % 588 2172 1
50 % 1223 4489 1
40 % 1223 4489 1
30 % 1359 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.