Sequence Similarity Clusters for the Entities in PDB 1F8R

Entity #1 | Chains: A,B,C,D
L-AMINO ACID OXIDASE protein, length: 498 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 3239
95 % 2 3 3989 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 3 4029
70 % 2 10 1959
50 % 2 10 1976
40 % 2 10 1982
30 % 2 10 1907

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures