Sequence Similarity Clusters for the Entities in PDB 1F8A

Entity #1 | Chains: B
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27758
95 % 21 42 1223 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 0.8
PDBFlex
90 % 21 42 1254
70 % 21 42 1286
50 % 21 42 1331
40 % 22 43 1310
30 % 22 43 1285
Entity #2 | Chains: C
Y(SEP)PT(SEP)S PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.