Sequence Similarity Clusters for the Entities in PDB 1F88

Entity #1 | Chains: A,B
RHODOPSIN protein, length: 348 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 22 965
95 % 9 30 1044
90 % 9 30 1064
70 % 9 30 1105
50 % 9 30 1152
40 % 9 30 1175
30 % 9 30 1154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.