Sequence Similarity Clusters for the Entities in PDB 1F80

Entity #1 | Chains: A,B,C
HOLO-(ACYL CARRIER PROTEIN) SYNTHASE protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27198
95 % 3 3 7289 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 3 3 7249
70 % 3 3 7052
50 % 5 5 4305
40 % 13 16 769
30 % 22 27 566
Entity #2 | Chains: D,E,F
ACYL CARRIER PROTEIN protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29447
95 % 1 3 15799 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 3 15456
70 % 1 3 14443
50 % 18 40 673
40 % 18 67 507
30 % 18 82 455

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures