Sequence Similarity Clusters for the Entities in PDB 1F80

Entity #1 | Chains: A,B,C
HOLO-(ACYL CARRIER PROTEIN) SYNTHASE protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29215
95 % 3 3 7306 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 3 3 7261
70 % 3 3 7077
50 % 5 5 4037
40 % 11 13 799
30 % 20 24 551
Entity #2 | Chains: D,E,F
ACYL CARRIER PROTEIN protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29797
95 % 1 3 15070 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 3 14790
70 % 1 3 13854
50 % 17 39 639
40 % 17 58 503
30 % 17 80 423

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.