Sequence Similarity Clusters for the Entities in PDB 1F6M

Entity #1 | Chains: A,B,E,F
THIOREDOXIN REDUCTASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19875
95 % 5 5 9155 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 4.3
PDBFlex
90 % 5 5 9074
70 % 9 9 4168
50 % 21 23 1249
40 % 40 42 650
30 % 50 53 530
Entity #2 | Chains: C,D,G,H
THIOREDOXIN 1 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24720
95 % 49 55 396 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.8
PDBFlex
90 % 49 55 428
70 % 51 57 429
50 % 144 186 135
40 % 157 202 131
30 % 174 238 125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures