Sequence Similarity Clusters for the Entities in PDB 1F6M

Entity #1 | Chains: A,B,E,F
THIOREDOXIN REDUCTASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19070
95 % 5 5 8827 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 4.3
PDBFlex
90 % 5 5 8750
70 % 9 9 4009
50 % 20 22 1314
40 % 39 41 655
30 % 48 50 553
Entity #2 | Chains: C,D,G,H
THIOREDOXIN 1 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23762
95 % 49 55 360 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.8
PDBFlex
90 % 49 55 384
70 % 51 57 399
50 % 142 184 124
40 % 154 199 128
30 % 171 235 120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.