Sequence Similarity Clusters for the Entities in PDB 1F6M

Entity #1 | Chains: A,B,E,F
THIOREDOXIN REDUCTASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19523
95 % 5 5 8983 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 4.3
PDBFlex
90 % 5 5 8904
70 % 9 9 4095
50 % 21 23 1228
40 % 40 42 641
30 % 50 52 538
Entity #2 | Chains: C,D,G,H
THIOREDOXIN 1 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24303
95 % 49 55 374 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.8
PDBFlex
90 % 49 55 402
70 % 51 57 408
50 % 143 185 131
40 % 156 201 130
30 % 173 237 123

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures