Sequence Similarity Clusters for the Entities in PDB 1F6F

Entity #1 | Chains: A
PLACENTAL LACTOGEN protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61993
95 % 1 1 43278
90 % 1 1 41094
70 % 1 1 36161
50 % 7 13 4877
40 % 7 13 4615
30 % 7 13 4224
Entity #2 | Chains: B,C
PROLACTIN RECEPTOR protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12924
95 % 1 3 12444 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.2
PDBFlex
90 % 1 3 12252
70 % 7 13 3768
50 % 7 13 3665
40 % 7 13 3536
30 % 7 15 2707

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures