Sequence Similarity Clusters for the Entities in PDB 1F6F

Entity #1 | Chains: A
PLACENTAL LACTOGEN protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47526
95 % 1 1 39466
90 % 1 1 37624
70 % 1 1 33344
50 % 7 13 4938
40 % 7 13 4636
30 % 7 13 4171
Entity #2 | Chains: B,C
PROLACTIN RECEPTOR protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13632
95 % 1 3 12875 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.2
PDBFlex
90 % 1 3 12661
70 % 7 13 3895
50 % 7 13 3792
40 % 7 13 3603
30 % 8 19 1881

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures