Sequence Similarity Clusters for the Entities in PDB 1F6F

Entity #1 | Chains: A
PLACENTAL LACTOGEN protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60392
95 % 1 1 42136
90 % 1 1 40062
70 % 1 1 35358
50 % 7 13 4749
40 % 7 13 4495
30 % 7 13 4117
Entity #2 | Chains: B,C
PROLACTIN RECEPTOR protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12579
95 % 1 3 12115 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.1
PDBFlex
90 % 1 3 11933
70 % 7 13 3668
50 % 7 13 3585
40 % 7 13 3457
30 % 7 15 2640

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.