Sequence Similarity Clusters for the Entities in PDB 1F6A

Entity #1 | Chains: A
HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41337
95 % 7 8 3088 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.3
PDBFlex
90 % 7 8 3136
70 % 7 8 3111
50 % 7 8 3038
40 % 25 28 1368
30 % 25 28 1348
Entity #2 | Chains: B,D
IG EPSILON CHAIN C REGION protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12423
95 % 10 12 1130 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.4
PDBFlex
90 % 10 12 1156
70 % 10 12 1187
50 % 10 12 1243
40 % 10 12 1254
30 % 4970 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.