Sequence Similarity Clusters for the Entities in PDB 1F6A

Entity #1 | Chains: A
HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 44444
95 % 7 8 3239 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.4
PDBFlex
90 % 7 8 3295
70 % 7 8 3244
50 % 7 8 3181
40 % 30 33 1265
30 % 30 33 1271
Entity #2 | Chains: B,D
IG EPSILON CHAIN C REGION protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10809
95 % 14 16 898 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 14 16 931
70 % 14 16 961
50 % 14 16 1001
40 % 14 16 1022
30 % 6470 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures