Sequence Similarity Clusters for the Entities in PDB 1F6A

Entity #1 | Chains: A
HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA-SUBUNIT protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41923
95 % 7 8 3129 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.3
PDBFlex
90 % 7 8 3174
70 % 7 8 3151
50 % 7 8 3080
40 % 25 28 1380
30 % 25 28 1360
Entity #2 | Chains: B,D
IG EPSILON CHAIN C REGION protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12589
95 % 10 12 1140 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 10 12 1168
70 % 10 12 1199
50 % 10 12 1252
40 % 10 12 1265
30 % 5037 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.