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2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z
Sequence Clustering and Redundancy Reduction Results
1F66
Sequence Clusters for the Sequence Entities in PDB 1F66
Entity #1: Chains: I,J - PALINDROMIC 146 BASE PAIR DNA FRAGMENT dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: A,E - HISTONE H3 protein, length: 136 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 36697
95% 21 102 121
90% 21 105 126
70% 21 105 141
50% 21 108 163
40% 21 108 183
30% 21 108 197
Entity #3: Chains: B,F - HISTONE H4 protein, length: 103 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 92 95
95% 23 109 113
90% 23 113 97
70% 23 113 117
50% 23 113 152
40% 23 113 169
30% 23 113 186
Entity #4: Chains: C,G - HISTONE H2A.Z protein, length: 128 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 18763
95% 1 3 10576
90% 1 3 10415
70% 1 3 9836
50% 18 104 164
40% 18 104 184
30% 18 104 198
Entity #5: Chains: D,H - HISTONE H2B protein, length: 126 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 10 44 232
95% 15 88 137
90% 15 90 146
70% 16 97 153
50% 16 97 182
40% 16 97 197
30% 16 97 215
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.