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2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z
Sequence Clustering and Redundancy Reduction Results
1F66
Sequence Clusters for the Sequence Entities in PDB 1F66
Entity #1: Chains: I,J - PALINDROMIC 146 BASE PAIR DNA FRAGMENT dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: A,E - HISTONE H3 protein, length: 136 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 35499
95% 20 98 98
90% 20 101 104
70% 20 101 123
50% 20 104 159
40% 20 104 181
30% 20 104 199
Entity #3: Chains: B,F - HISTONE H4 protein, length: 103 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 84 92
95% 21 100 96
90% 21 104 97
70% 21 104 115
50% 21 104 153
40% 21 104 176
30% 21 104 194
Entity #4: Chains: C,G - HISTONE H2A.Z protein, length: 128 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 18082
95% 1 3 10222
90% 1 3 10068
70% 1 3 9536
50% 17 101 150
40% 17 101 175
30% 17 101 192
Entity #5: Chains: D,H - HISTONE H2B protein, length: 126 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 42 243
95% 14 86 131
90% 14 88 137
70% 15 94 128
50% 15 94 173
40% 15 94 194
30% 15 94 210
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.