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2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z
Sequence Clustering and Redundancy Reduction Results
1F66
Sequence Clusters for the Sequence Entities in PDB 1F66
Entity #1: Chains: I,J - PALINDROMIC 146 BASE PAIR DNA FRAGMENT dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: A,E - HISTONE H3 protein, length: 136 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 34654
95% 20 97 84
90% 20 100 88
70% 20 100 111
50% 20 103 143
40% 20 103 171
30% 20 103 192
Entity #3: Chains: B,F - HISTONE H4 protein, length: 103 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 84 74
95% 21 99 82
90% 21 103 81
70% 21 103 99
50% 21 103 137
40% 21 103 166
30% 21 103 188
Entity #4: Chains: C,G - HISTONE H2A.Z protein, length: 128 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17683
95% 1 3 10020
90% 1 3 9874
70% 1 3 9351
50% 17 101 134
40% 17 101 164
30% 17 101 186
Entity #5: Chains: D,H - HISTONE H2B protein, length: 126 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 42 238
95% 14 86 105
90% 14 88 104
70% 15 94 113
50% 15 94 155
40% 15 94 182
30% 15 94 202
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.