Sequence Similarity Clusters for the Entities in PDB 1F5R

Entity #1 | Chains: A
TRYPSIN II, ANIONIC protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60108
95 % 7 36 1353 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 7 36 1378
70 % 263 546 19
50 % 277 697 14
40 % 510 1719 4
30 % 531 1869 6
Entity #2 | Chains: I
PANCREATIC TRYPSIN INHIBITOR protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 16400
95 % 2 5 15323 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 5 15051
70 % 35 115 177
50 % 42 149 182
40 % 43 163 178
30 % 43 163 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures