Sequence Similarity Clusters for the Entities in PDB 1F5R

Entity #1 | Chains: A
TRYPSIN II, ANIONIC protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59287
95 % 7 36 1334 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 7 36 1362
70 % 251 532 18
50 % 265 683 14
40 % 497 1695 4
30 % 518 1845 6
Entity #2 | Chains: I
PANCREATIC TRYPSIN INHIBITOR protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 16132
95 % 2 5 15109 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 5 14830
70 % 35 115 174
50 % 42 148 176
40 % 43 162 176
30 % 43 162 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.