Sequence Similarity Clusters for the Entities in PDB 1F5R

Entity #1 | Chains: A
TRYPSIN II, ANIONIC protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61327
95 % 7 36 1389 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 7 36 1415
70 % 267 557 19
50 % 281 708 14
40 % 534 1864 4
30 % 535 1886 6
Entity #2 | Chains: I
PANCREATIC TRYPSIN INHIBITOR protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 16807
95 % 2 5 15655 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 5 15368
70 % 35 115 179
50 % 42 149 187
40 % 43 163 183
30 % 43 163 195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures