Sequence Similarity Clusters for the Entities in PDB 1F5Q

Entity #1 | Chains: A,C
CYCLIN DEPENDENT KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 328 361 21
95 % 342 376 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 342 376 34
70 % 342 376 42
50 % 361 401 55
40 % 381 457 41
30 % 2967 3732 2
Entity #2 | Chains: B,D
GAMMA HERPESVIRUS CYCLIN protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37069
95 % 1 1 28687 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 27705
70 % 1 1 25076
50 % 1 1 21498
40 % 1 1 18934
30 % 1 1 16055

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.