Sequence Similarity Clusters for the Entities in PDB 1F5P

Entity #1 | Chains: A,B,C,D,E,F
HEMOGLOBIN V protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 1280
95 % 5 5 1524 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 5 5 1551
70 % 5 5 1568
50 % 5 5 1621
40 % 7 7 1380
30 % 1143 1294 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures