Sequence Similarity Clusters for the Entities in PDB 1F5O

Entity #1 | Chains: A,B,C,D,E,F
HEMOGLOBIN V protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 5370
95 % 4 5 1457 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 4 5 1484
70 % 4 5 1492
50 % 4 5 1549
40 % 6 7 1341
30 % 1069 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures