Sequence Similarity Clusters for the Entities in PDB 1F5O

Entity #1 | Chains: A,B,C,D,E,F
HEMOGLOBIN V protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 1294
95 % 4 5 1540 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 4 5 1567
70 % 4 5 1587
50 % 4 5 1634
40 % 6 7 1384
30 % 1129 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures