Sequence Similarity Clusters for the Entities in PDB 1F5O

Entity #1 | Chains: A,B,C,D,E,F
HEMOGLOBIN V protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 1335
95 % 4 5 1582 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 4 5 1610
70 % 4 5 1638
50 % 4 5 1692
40 % 6 7 1416
30 % 1145 1315 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures