Sequence Similarity Clusters for the Entities in PDB 1F5K

Entity #1 | Chains: U
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 65 619
95 % 46 112 333 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.6
PDBFlex
90 % 46 112 349
70 % 46 117 369
50 % 46 117 434
40 % 914 1885 4
30 % 919 1899 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures