Sequence Similarity Clusters for the Entities in PDB 1F5J

Entity #1 | Chains: A,B
BETA-1,4-XYLANASE protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37898
95 % 1 1 32165 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 30802
70 % 1 1 27574
50 % 56 96 353
40 % 56 99 363
30 % 60 103 349

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures