Sequence Similarity Clusters for the Entities in PDB 1F5E

Entity #1 | Chains: A
DNA (5'-D(P*CP*GP*TP*GP*CP*GP*GP*AP*TP*C)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
DNA (5'-D(P*GP*AP*TP*CP*CP*GP*CP*AP*CP*G)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
ETHANOL REGULON TRANSCRIPTIONAL FACTOR protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21687
95 % 1 4 19540
90 % 1 4 18990
70 % 1 4 17459
50 % 1 4 15203
40 % 1 4 13513
30 % 1 4 11397

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures