Sequence Similarity Clusters for the Entities in PDB 1F58

Entity #1 | Chains: L
PROTEIN (IGG1 ANTIBODY 58.2 (LIGHT CHAIN)) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26248
95 % 1 3 21873
90 % 7 78 267
70 % 388 1775 2
50 % 984 4367 1
40 % 984 4367 1
30 % 1077 5151 1
Entity #2 | Chains: H
PROTEIN (IGG1 ANTIBODY 58.2 (HEAVY CHAIN)) protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25990
95 % 1 3 21687
90 % 1 3 21061
70 % 477 2111 1
50 % 985 4367 1
40 % 985 4367 1
30 % 1078 5151 1
Entity #3 | Chains: P
PROTEIN (EXTERIOR MEMBRANE GLYCOPROTEIN(GP120)) protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 9436
95 % 3 6 9484
90 % 3 6 9372
70 % 6 15 2859
50 % 6 15 2807
40 % 6 15 2780
30 % 6 15 2602

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.