Sequence Similarity Clusters for the Entities in PDB 1F58

Entity #1 | Chains: L
PROTEIN (IGG1 ANTIBODY 58.2 (LIGHT CHAIN)) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27353
95 % 1 3 22804
90 % 9 99 152
70 % 500 2280 1
50 % 1033 4619 1
40 % 1033 4619 1
30 % 1134 5440 1
Entity #2 | Chains: H
PROTEIN (IGG1 ANTIBODY 58.2 (HEAVY CHAIN)) protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27088
95 % 1 3 22620
90 % 1 3 21946
70 % 501 2238 2
50 % 1034 4619 1
40 % 1034 4619 1
30 % 1135 5440 1
Entity #3 | Chains: P
PROTEIN (EXTERIOR MEMBRANE GLYCOPROTEIN(GP120)) protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 9826
95 % 3 6 9896
90 % 3 6 9786
70 % 6 15 2969
50 % 6 15 2924
40 % 6 15 2885
30 % 6 15 2700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.