Sequence Similarity Clusters for the Entities in PDB 1F51

Entity #1 | Chains: A,B,C,D
SPORULATION INITIATION PHOSPHOTRANSFERASE B protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7140
95 % 2 3 7251 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 2 3 7220
70 % 2 3 7022
50 % 2 3 6499
40 % 2 3 6028
30 % 2 3 5286
Entity #2 | Chains: E,F,G,H
SPORULATION INITIATION PHOSPHOTRANSFERASE F protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 4674
95 % 5 12 2808 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 5 12 2868
70 % 5 12 2830
50 % 5 12 2798
40 % 5 12 2719
30 % 225 262 123

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures