Sequence Similarity Clusters for the Entities in PDB 1F4S

Entity #1 | Chains: A
DNA (5'-D(P*CP*GP*TP*GP*CP*GP*GP*AP*TP*C)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
DNA (5'-D(P*GP*AP*TP*CP*CP*GP*CP*AP*CP*G)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
ETHANOL REGULON TRANSCRIPTIONAL FACTOR protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 23825
95 % 2 4 20318
90 % 2 4 19756
70 % 2 4 18196
50 % 2 4 15833
40 % 2 4 14132
30 % 2 4 12090

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.