Sequence Similarity Clusters for the Entities in PDB 1F45

Entity #1 | Chains: A
INTERLEUKIN-12 BETA CHAIN protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 2743
95 % 9 13 3011 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 9 13 3062
70 % 9 13 3055
50 % 9 13 3006
40 % 9 13 2930
30 % 9 13 2710
Entity #2 | Chains: B
INTERLEUKIN-12 ALPHA CHAIN protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30430
95 % 2 2 26495 Flexibility: Medium
Max RMSD: 5.1, Avg RMSD: 5.1
PDBFlex
90 % 2 2 25560
70 % 2 2 23131
50 % 2 2 19860
40 % 2 2 17543
30 % 2 2 14706

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures