Sequence Similarity Clusters for the Entities in PDB 1F3V

Entity #1 | Chains: A
TUMOR NECROSIS FACTOR RECEPTOR TYPE 1 ASSOCIATED DEATH DOMAIN PROTEIN protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 42639
95 % 1 2 32295
90 % 1 2 30893
70 % 1 2 27588
50 % 1 2 23543
40 % 1 2 20713
30 % 1 2 17546
Entity #2 | Chains: B
TUMOR NECROSIS FACTOR RECEPTOR-ASSOCIATED PROTEIN protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2661
95 % 5 10 1083 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 5 10 1104
70 % 5 10 1143
50 % 6 19 916
40 % 7 23 740
30 % 8 27 675

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.