Sequence Similarity Clusters for the Entities in PDB 1F3V

Entity #1 | Chains: A
TUMOR NECROSIS FACTOR RECEPTOR TYPE 1 ASSOCIATED DEATH DOMAIN PROTEIN protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 44090
95 % 1 2 33326
90 % 1 2 31833
70 % 1 2 28378
50 % 1 2 24184
40 % 1 2 21270
30 % 1 2 18010
Entity #2 | Chains: B
TUMOR NECROSIS FACTOR RECEPTOR-ASSOCIATED PROTEIN protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2781
95 % 5 10 1128 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 5 10 1152
70 % 5 10 1178
50 % 6 19 932
40 % 7 23 761
30 % 8 27 700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures