Sequence Similarity Clusters for the Entities in PDB 1F3V

Entity #1 | Chains: A
TUMOR NECROSIS FACTOR RECEPTOR TYPE 1 ASSOCIATED DEATH DOMAIN PROTEIN protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 43505
95 % 1 2 32904
90 % 1 2 31445
70 % 1 2 28047
50 % 1 2 23921
40 % 1 2 21039
30 % 1 2 17808
Entity #2 | Chains: B
TUMOR NECROSIS FACTOR RECEPTOR-ASSOCIATED PROTEIN protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2747
95 % 5 10 1108 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 5 10 1129
70 % 5 10 1164
50 % 6 19 924
40 % 7 23 755
30 % 8 27 687

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures