Sequence Similarity Clusters for the Entities in PDB 1F3U

Entity #1 | Chains: A,C,E,G
TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23250
95 % 1 1 19912
90 % 1 1 19365
70 % 1 1 17806
50 % 1 1 15475
40 % 1 1 13794
30 % 1 1 11796
Entity #2 | Chains: B,D,F,H
TRANSCRIPTION INITIATION FACTOR IIF, ALPHA SUBUNIT protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 21857
95 % 1 1 18914
90 % 1 1 18414
70 % 1 1 17008
50 % 1 1 14785
40 % 1 1 13167
30 % 1 1 11266

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.