Sequence Similarity Clusters for the Entities in PDB 1F3U

Entity #1 | Chains: A,C,E,G
TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 21505
95 % 1 1 18414
90 % 1 1 17927
70 % 1 1 16574
50 % 1 1 14467
40 % 1 1 12911
30 % 1 1 11064
Entity #2 | Chains: B,D,F,H
TRANSCRIPTION INITIATION FACTOR IIF, ALPHA SUBUNIT protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 20203
95 % 1 1 17485
90 % 1 1 17041
70 % 1 1 15807
50 % 1 1 13804
40 % 1 1 12300
30 % 1 1 10538

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.