POP-OUT | CLOSE

An Information Portal to 107620 Biological Macromolecular Structures

HISTOCOMPATIBILITY ANTIGEN I-AG7
Sequence Clustering and Redundancy Reduction Results
1F3J
Sequence Clusters for the Sequence Entities in PDB 1F3J
Entity #1: Chains: A,D - H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN protein, length: 182 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 6994
95% 4 6 7291
90% 17 22 1290
70% 28 35 760
50% 109 129 142
40% 109 129 168
30% 229 270 59
Entity #2: Chains: B,E - MHC CLASS II NOD protein, length: 187 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 9772
95% 2 4 9588
90% 11 14 2741
70% 101 120 126
50% 109 129 141
40% 109 129 167
30% 230 270 59
Entity #3: Chains: P,Q - LYSOZYME C protein, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.