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HISTOCOMPATIBILITY ANTIGEN I-AG7
Sequence Clustering and Redundancy Reduction Results
1F3J
Sequence Clusters for the Sequence Entities in PDB 1F3J
Entity #1: Chains: A,D - H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN protein, length: 182 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 6685
95% 4 6 7034
90% 17 22 1249
70% 28 35 732
50% 108 128 124
40% 108 128 154
30% 227 268 56
Entity #2: Chains: B,E - MHC CLASS II NOD protein, length: 187 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 9366
95% 2 4 9269
90% 11 14 2621
70% 101 120 105
50% 108 128 123
40% 108 128 153
30% 228 268 56
Entity #3: Chains: P,Q - LYSOZYME C protein, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.