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An Information Portal to 109093 Biological Macromolecular Structures

HISTOCOMPATIBILITY ANTIGEN I-AG7
Sequence Clustering and Redundancy Reduction Results
1F3J
Sequence Clusters for the Sequence Entities in PDB 1F3J
Entity #1: Chains: A,D - H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN protein, length: 182 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 7102
95% 4 6 7397
90% 17 22 1307
70% 28 35 770
50% 109 129 148
40% 109 129 172
30% 229 270 60
Entity #2: Chains: B,E - MHC CLASS II NOD protein, length: 187 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 9916
95% 2 4 9707
90% 11 14 2777
70% 101 120 143
50% 109 129 147
40% 109 129 171
30% 230 270 60
Entity #3: Chains: P,Q - LYSOZYME C protein, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.