Sequence Similarity Clusters for the Entities in PDB 1F34

Entity #1 | Chains: A
PEPSIN A protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 18985
95 % 5 6 10274 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 5 6 10151
70 % 10 11 5503
50 % 21 22 2489
40 % 79 116 242
30 % 657 717 29
Entity #2 | Chains: B
MAJOR PEPSIN INHIBITOR PI-3 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 44041
95 % 2 2 33225 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 2 31771
70 % 2 2 28355
50 % 2 2 24196
40 % 2 2 21289
30 % 2 2 18034

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.