Sequence Similarity Clusters for the Entities in PDB 1F2U

Entity #1 | Chains: A,C
RAD50 ABC-ATPASE protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 22648
95 % 2 3 19533 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 2 3 19021
70 % 2 3 17541
50 % 2 3 15246
40 % 2 3 13570
30 % 2 3 11614
Entity #2 | Chains: B,D
RAD50 ABC-ATPASE protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28780
95 % 2 3 19552 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.3
PDBFlex
90 % 2 3 19038
70 % 2 3 17558
50 % 2 3 15257
40 % 2 3 13581
30 % 2 3 11625

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.