Sequence Similarity Clusters for the Entities in PDB 1F2T

Entity #1 | Chains: A
RAD50 ABC-ATPASE protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 19743
95 % 1 3 17937 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 1 3 17495
70 % 1 3 16186
50 % 1 3 14163
40 % 1 3 12647
30 % 1 3 10655
Entity #2 | Chains: B
RAD50 ABC-ATPASE protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28300
95 % 1 3 17938 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.3
PDBFlex
90 % 1 3 17496
70 % 1 3 16187
50 % 1 3 14164
40 % 1 3 12648
30 % 1 3 10656

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures