Sequence Similarity Clusters for the Entities in PDB 1F2I

Entity #1 | Chains: A,B,C,D,E,F
5'-D(*AP*TP*GP*GP*GP*CP*GP*CP*GP*CP*CP*CP*AP*T)-3' dna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: G,H,I,J,K,L
FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO ZIF12 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13707
95 % 1 1 13001 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 1 12793
70 % 1 1 12015
50 % 1 1 10739
40 % 1 1 9747
30 % 1 1 8481

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.