Sequence Similarity Clusters for the Entities in PDB 1F23

Entity #1 | Chains: A,B,C,D,E,F
TRANSMEMBRANE GLYCOPROTEIN protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14201
95 % 10 13 3665 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.6
PDBFlex
90 % 10 13 3719
70 % 12 17 1696
50 % 12 17 1734
40 % 12 17 1737
30 % 12 17 1695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F23 1 A, B, C, D, E, F TRANSMEMBRANE GLYCOPROTEIN ECTODOMAIN 11676