Sequence Similarity Clusters for the Entities in PDB 1F23

Entity #1 | Chains: A,B,C,D,E,F
TRANSMEMBRANE GLYCOPROTEIN protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13581
95 % 10 13 3512 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.5
PDBFlex
90 % 10 13 3562
70 % 12 17 1616
50 % 12 17 1661
40 % 12 17 1670
30 % 12 17 1630

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.