Sequence Similarity Clusters for the Entities in PDB 1F1W

Entity #1 | Chains: A
PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 44219
95 % 42 55 691 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 42 55 715
70 % 45 63 658
50 % 51 80 541
40 % 95 159 214
30 % 117 239 160
Entity #2 | Chains: B
S(PTR)VNVQN PHOSPHOPEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures