Sequence Similarity Clusters for the Entities in PDB 1F1V

Entity #1 | Chains: A,B
HOMOPROTOCATECHUATE 2,3-DIOXYGENASE protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12864
95 % 3 3 12260 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 3 12076
70 % 4 4 7239
50 % 4 4 6681
40 % 4 4 6197
30 % 5 5 3926

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures