Sequence Similarity Clusters for the Entities in PDB 1F1U

Entity #1 | Chains: A,B
HOMOPROTOCATECHUATE 2,3-DIOXYGENASE protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12913
95 % 1 3 12312 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 3 12122
70 % 1 4 7282
50 % 1 4 6710
40 % 1 4 6218
30 % 1 5 3942

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures