Sequence Similarity Clusters for the Entities in PDB 1F1M

Entity #1 | Chains: A,B,C,D
OUTER SURFACE PROTEIN C protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21578
95 % 1 1 19404 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 18871
70 % 1 2 9161
50 % 1 3 7014
40 % 1 5 2920
30 % 1 5 2695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures