Sequence Similarity Clusters for the Entities in PDB 1F1J

Entity #1 | Chains: A,B
CASPASE-7 PROTEASE protein, length: 305 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 34551
95 % 3 17 1506
90 % 3 17 1530
70 % 3 17 1561
50 % 54 76 382
40 % 67 99 239
30 % 71 111 213
Entity #2 | Chains: C,D
ACE-ASP-GLU-VAL-ASP-CHO protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.