Sequence Similarity Clusters for the Entities in PDB 1F1B

Entity #1 | Chains: A,C
ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12188
95 % 23 63 264 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.6
PDBFlex
90 % 23 64 272
70 % 24 66 290
50 % 25 70 279
40 % 30 78 252
30 % 65 141 138
Entity #2 | Chains: B,D
ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 56 219
95 % 19 59 292 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.8
PDBFlex
90 % 19 59 301
70 % 19 60 341
50 % 19 61 390
40 % 19 61 412
30 % 20 62 413

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.