Sequence Similarity Clusters for the Entities in PDB 1F1B

Entity #1 | Chains: A,C
ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 62 218
95 % 23 63 280 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 23 64 291
70 % 24 66 321
50 % 25 72 306
40 % 33 82 255
30 % 67 143 149
Entity #2 | Chains: B,D
ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 58 239
95 % 19 59 306 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.9
PDBFlex
90 % 19 59 316
70 % 19 60 362
50 % 19 61 420
40 % 19 61 448
30 % 20 62 451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures