Sequence Similarity Clusters for the Entities in PDB 1F11

Entity #1 | Chains: A,C
F124 IMMUNOGLOBULIN (KAPPA LIGHT CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40169
95 % 5 10 5083 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.1
PDBFlex
90 % 53 99 152
70 % 1544 2287 1
50 % 3133 4633 1
40 % 3133 4633 1
30 % 3674 5461 1
Entity #2 | Chains: B,D
F124 IMMUNOGLOBULIN (IGG1 HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39870
95 % 1 1 30547 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 2 3 14014
70 % 1514 2244 2
50 % 3134 4633 1
40 % 3134 4633 1
30 % 3675 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.