Sequence Similarity Clusters for the Entities in PDB 1F11

Entity #1 | Chains: A,C
F124 IMMUNOGLOBULIN (KAPPA LIGHT CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39534
95 % 5 10 4982 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 52 98 152
70 % 1531 2264 1
50 % 3107 4587 1
40 % 3107 4587 1
30 % 3633 5392 1
Entity #2 | Chains: B,D
F124 IMMUNOGLOBULIN (IGG1 HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39237
95 % 1 1 30043 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 2 3 13783
70 % 1502 2222 2
50 % 3108 4587 1
40 % 3108 4587 1
30 % 3634 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.