Sequence Similarity Clusters for the Entities in PDB 1F11

Entity #1 | Chains: A,C
F124 IMMUNOGLOBULIN (KAPPA LIGHT CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40612
95 % 5 10 5158 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 54 101 155
70 % 1587 2346 1
50 % 3219 4752 1
40 % 3219 4752 1
30 % 3780 5606 1
Entity #2 | Chains: B,D
F124 IMMUNOGLOBULIN (IGG1 HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40312
95 % 1 1 30874
90 % 2 3 14176
70 % 1553 2299 2
50 % 3220 4752 1
40 % 3220 4752 1
30 % 3781 5606 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.