Sequence Similarity Clusters for the Entities in PDB 1F0V

Entity #1 | Chains: M,N,O,P
5'-D(*CP*G)-3' dna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D
RIBONUCLEASE A protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 85 219 81
95 % 101 243 73 Flexibility: Low
Max RMSD: 18.1, Avg RMSD: 2.1
PDBFlex
90 % 108 267 65
70 % 111 281 73
50 % 111 281 101
40 % 133 372 88
30 % 146 463 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures