Sequence Similarity Clusters for the Entities in PDB 1F08

Entity #1 | Chains: A,B
REPLICATION PROTEIN E1 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4582
95 % 1 3 5377 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 1 3 5403
70 % 1 3 5301
50 % 1 3 5054
40 % 1 3 4775
30 % 2 4 4126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures