Sequence Similarity Clusters for the Entities in PDB 1F08

Entity #1 | Chains: A,B
REPLICATION PROTEIN E1 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4378
95 % 1 3 5168 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 1 3 5190
70 % 1 3 5100
50 % 1 3 4875
40 % 1 3 4616
30 % 2 4 3986

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.