Sequence Similarity Clusters for the Entities in PDB 1F06

Entity #1 | Chains: A,B
MESO-DIAMINOPIMELATE D-DEHYDROGENASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10023
95 % 2 6 6183 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 2.5
PDBFlex
90 % 2 6 6166
70 % 2 6 6015
50 % 2 6 5628
40 % 8 15 1992
30 % 11 19 1386

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.