Sequence Similarity Clusters for the Entities in PDB 1F06

Entity #1 | Chains: A,B
MESO-DIAMINOPIMELATE D-DEHYDROGENASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 11472
95 % 2 6 6628 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.5
PDBFlex
90 % 2 6 6615
70 % 2 6 6416
50 % 2 6 5990
40 % 8 15 2127
30 % 11 19 1475

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures