Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36921
95 % 2 2 28829 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 27825
70 % 2 2 25128
50 % 2 2 21535
40 % 2 2 18995
30 % 2 2 16139
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71759
95 % 1 1 49855
90 % 1 1 47332
70 % 1 1 41558
50 % 1 1 35432
40 % 1 1 31201
30 % 1 1 26326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F02 2 T TRANSLOCATED INTIMIN RECEPTOR INTIMIN-BINDING DOMAIN 562