Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39168
95 % 2 2 33108 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 31697
70 % 2 2 28323
50 % 2 2 24212
40 % 2 2 21301
30 % 2 2 17778
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57966
95 % 1 1 47444
90 % 1 1 45071
70 % 1 1 39601
50 % 1 1 33603
40 % 1 1 29434
30 % 1 1 24571

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F02 2 T TRANSLOCATED INTIMIN RECEPTOR INTIMIN-BINDING DOMAIN 562