Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40056
95 % 2 2 33826 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 32339
70 % 2 2 28846
50 % 2 2 24641
40 % 2 2 21675
30 % 2 2 18101
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59112
95 % 1 1 48327
90 % 1 1 45859
70 % 1 1 40252
50 % 1 1 34134
40 % 1 1 29876
30 % 1 1 24954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F00 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562
2 1F02 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562