Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36980
95 % 2 2 28875 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 27870
70 % 2 2 25170
50 % 2 2 21565
40 % 2 2 19024
30 % 2 2 16163
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71844
95 % 1 1 49906
90 % 1 1 47382
70 % 1 1 41600
50 % 1 1 35465
40 % 1 1 31232
30 % 1 1 26355

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F00 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562
2 1F02 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562