Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40850
95 % 2 2 34475 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 32937
70 % 2 2 29334
50 % 2 2 25083
40 % 2 2 22072
30 % 2 2 18433
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60163
95 % 1 1 49199
90 % 1 1 46656
70 % 1 1 40918
50 % 1 1 34731
40 % 1 1 30425
30 % 1 1 25422

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F00 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562
2 1F02 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562