Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40333
95 % 2 2 34074 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 32583
70 % 2 2 29057
50 % 2 2 24828
40 % 2 2 21844
30 % 2 2 18250
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59493
95 % 1 1 48663
90 % 1 1 46189
70 % 1 1 40548
50 % 1 1 34406
40 % 1 1 30121
30 % 1 1 25151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F00 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562
2 1F02 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562