Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39407
95 % 2 2 33305 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 31874
70 % 2 2 28475
50 % 2 2 24329
40 % 2 2 21415
30 % 2 2 17868
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58302
95 % 1 1 47709
90 % 1 1 45313
70 % 1 1 39792
50 % 1 1 33756
40 % 1 1 29552
30 % 1 1 24674

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1F00 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562
2 1F02 1 I INTIMIN C-TERMINAL DOMAIN (282 RESIDUES) 562