Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39717
95 % 2 2 33556 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 32103
70 % 2 2 28669
50 % 2 2 24476
40 % 2 2 21534
30 % 2 2 17973
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58693
95 % 1 1 47999
90 % 1 1 45572
70 % 1 1 40017
50 % 1 1 33942
40 % 1 1 29708
30 % 1 1 24816

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures