Sequence Similarity Clusters for the Entities in PDB 1F02

Entity #1 | Chains: I
INTIMIN protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41847
95 % 2 2 35278 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 33696
70 % 2 2 29962
50 % 2 2 25601
40 % 2 2 22522
30 % 2 2 18789
Entity #2 | Chains: T
TRANSLOCATED INTIMIN RECEPTOR protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61519
95 % 1 1 50270
90 % 1 1 47675
70 % 1 1 41775
50 % 1 1 35430
40 % 1 1 31046
30 % 1 1 25892

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures