Sequence Similarity Clusters for the Entities in PDB 1EZX

Entity #1 | Chains: A
ALPHA-1-ANTITRYPSIN protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 14775
95 % 12 26 1944 Flexibility: Medium
Max RMSD: 17.3, Avg RMSD: 4.9
PDBFlex
90 % 12 26 1991
70 % 12 26 2010
50 % 31 48 888
40 % 67 97 378
30 % 102 178 184
Entity #2 | Chains: B
ALPHA-1-ANTITRYPSIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 14292
95 % 2 6 13539 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 2 7 10761
70 % 2 7 10209
50 % 3 10 5934
40 % 3 10 5554
30 % 3 10 4996
Entity #3 | Chains: C
TRYPSIN protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 376 389 34
95 % 432 448 33
90 % 432 448 34
70 % 514 532 18
50 % 644 683 14
40 % 1531 1695 4
30 % 1654 1845 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.