Sequence Similarity Clusters for the Entities in PDB 1EZX

Entity #1 | Chains: A
ALPHA-1-ANTITRYPSIN protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15371
95 % 14 28 1871 Flexibility: Medium
Max RMSD: 17.3, Avg RMSD: 4.9
PDBFlex
90 % 14 28 1913
70 % 14 28 1929
50 % 33 50 879
40 % 69 99 411
30 % 104 180 188
Entity #2 | Chains: B
ALPHA-1-ANTITRYPSIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 14853
95 % 2 6 14031 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 2 7 11165
70 % 2 7 10582
50 % 3 10 6137
40 % 3 10 5738
30 % 3 10 5165
Entity #3 | Chains: C
TRYPSIN protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 394 412 39
95 % 450 471 18
90 % 450 471 20
70 % 534 557 19
50 % 664 708 14
40 % 1674 1863 4
30 % 1686 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures