Sequence Similarity Clusters for the Entities in PDB 1EYX

Entity #1 | Chains: A,K
R-PHYCOERYTHRIN protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34255
95 % 1 1 29400 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 28223
70 % 10 12 79
50 % 10 12 108
40 % 29 55 85
30 % 68 145 16
Entity #2 | Chains: B,L
R-PHYCOERYTHRIN protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34254
95 % 1 1 29399 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 21175
70 % 12 14 87
50 % 35 63 40
40 % 39 88 34
30 % 69 145 16
Entity #3 | Chains: G,H
R-PHYCOERYTHRIN protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures