Sequence Similarity Clusters for the Entities in PDB 1EYX

Entity #1 | Chains: A,K
R-PHYCOERYTHRIN protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44798
95 % 1 1 33803 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 32279
70 % 10 12 77
50 % 10 12 105
40 % 28 54 78
30 % 66 143 18
Entity #2 | Chains: B,L
R-PHYCOERYTHRIN protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44184
95 % 1 1 33397 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 19204
70 % 12 14 82
50 % 34 62 40
40 % 38 87 32
30 % 67 143 18
Entity #3 | Chains: G,H
R-PHYCOERYTHRIN protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures