Sequence Similarity Clusters for the Entities in PDB 1EYS

Entity #1 | Chains: C
PHOTOSYNTHETIC REACTION CENTER protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51763
95 % 1 3 15635
90 % 1 3 15333
70 % 1 3 14325
50 % 1 3 12640
40 % 1 3 11404
30 % 1 3 9869
Entity #2 | Chains: L
PHOTOSYNTHETIC REACTION CENTER protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54946
95 % 1 5 8636 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 5 8566
70 % 1 5 8223
50 % 41 126 331
40 % 41 126 357
30 % 41 126 366
Entity #3 | Chains: M
PHOTOSYNTHETIC REACTION CENTER protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53350
95 % 1 5 8458 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 5 8397
70 % 1 5 8069
50 % 41 126 330
40 % 41 126 355
30 % 41 126 364
Entity #4 | Chains: H
PHOTOSYNTHETIC REACTION CENTER protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55877
95 % 1 5 8731 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 5 8653
70 % 1 5 8300
50 % 1 5 7541
40 % 41 126 358
30 % 41 126 367

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.