Sequence Similarity Clusters for the Entities in PDB 1EYS

Entity #1 | Chains: C
PHOTOSYNTHETIC REACTION CENTER protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52494
95 % 1 3 15866
90 % 1 3 15557
70 % 1 3 14524
50 % 1 3 12799
40 % 1 3 11550
30 % 1 3 10005
Entity #2 | Chains: L
PHOTOSYNTHETIC REACTION CENTER protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55701
95 % 1 5 8785 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 5 8714
70 % 1 5 8357
50 % 42 129 340
40 % 42 129 369
30 % 42 129 369
Entity #3 | Chains: M
PHOTOSYNTHETIC REACTION CENTER protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54102
95 % 1 5 8609 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 5 8544
70 % 1 5 8202
50 % 42 129 339
40 % 42 129 368
30 % 42 129 368
Entity #4 | Chains: H
PHOTOSYNTHETIC REACTION CENTER protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56639
95 % 1 5 8884 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 5 8805
70 % 1 5 8438
50 % 1 5 7658
40 % 42 129 370
30 % 42 129 370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.