Sequence Similarity Clusters for the Entities in PDB 1EYG

Entity #1 | Chains: Q,R
SINGLE STRANDED 28-MER OF D(C) dna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D
SINGLE-STRAND DNA-BINDING PROTEIN protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9454
95 % 1 2 9337 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 2 9234
70 % 1 2 8842
50 % 1 2 8063
40 % 1 2 7374
30 % 1 2 6416

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures